{"id":1497,"date":"2026-02-05T14:22:56","date_gmt":"2026-02-05T13:22:56","guid":{"rendered":"https:\/\/insilico-analysis.com\/?page_id=1497"},"modified":"2026-02-06T00:26:05","modified_gmt":"2026-02-05T23:26:05","slug":"our-scientific-contributions","status":"publish","type":"page","link":"https:\/\/insilico-analysis.com\/index.php\/our-scientific-contributions\/","title":{"rendered":"Our scientific contributions"},"content":{"rendered":"
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We have contributed to more than 200 peer-reviewed scientific articles, leveraging our strong expertise in the field of bioinformatics. Our contributions span data analysis, computational modeling, and the interpretation of complex\n biological datasets, supporting high-quality research across diverse areas of the life sciences.<\/p>\n

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\u00d8 \n Enriching African genome representation through the AGenDA project.<\/a>\n <\/p>\n

\u00d8 \n DeepPlantAllergy: deep learning for explainable prediction of allergenicity in plant proteins.<\/a>\n <\/p>\n

\u00d8 \n Exome sequencing reveals new insights into the germline landscape of inflammatory breast cancer among Tunisian patients.<\/a>\n <\/p>\n

\u00d8 \n Exploring Thymus vulgaris Extract as a Phytotherapeutic Agent: A Multifaceted Approach to tackle Avian Colibacillosis and Drug Resistance.<\/a>\n <\/p>\n

\u00d8 \n ACTN3 R577X (rs1815739) Polymorphism and Athlete Status: An Additional Case-Control Association Study and Meta-Analysis.<\/a>\n <\/p>\n

\u00d8 \n Interleukin Activity in Miscarried Women with Toxoplasmosis and Anti Thyroid Peroxidase (Anti-TPO).<\/a>\n <\/p>\n

\u00d8 \n Impact of the COVID-19 pandemic on the molecular epidemiology of respiratory rhinoviruses and enteroviruses in Tunisia.<\/a>\n <\/p>\n

\u00d8 \n PROFILES FOR SOME KEY CYTOKINES AND AUTO-ANTIBODIES IN LATENT TOXOPLASMOSIS IN ABORTED WOMEN.<\/a>\n <\/p>\n

\u00d8 \n Responsible governance of genomics data and biospecimens in the context of broad consent: experiences of a pioneering access committee in Africa.<\/a>\n <\/p>\n

\u00d8 \n Genome Tunisia Project: paving the way for precision medicine in North Africa.<\/a>\n <\/p>\n

\u00d8 \n Screening clusters of charged residues in plants’ mitochondrial proteins and biological significance.<\/a>\n <\/p>\n

\u00d8 \n Integrative Bioinformatics Approaches to Uncover Hub Genes and Pathways Involved in Cardiovascular Diseases.<\/a>\n <\/p>\n

\u00d8 \n Charge cluster occurrence in land plants’ mitochondrial proteomes with functional and structural insights.<\/a>\n <\/p>\n

\u00d8 \n Prevalence of comorbid asthma in Tunisian patients with COVID-19: clinical features and outcomes.<\/a>\n <\/p>\n

\u00d8 \n Prevalence of self-reported food allergy in Tunisia: General trends and probabilistic modeling.<\/a>\n <\/p>\n

\u00d8 \n \u03b3-tocopherol methyltransferase gene sequencing and SNP discovery associated with olive oil quality.<\/a>\n <\/p>\n

\u00d8 \n Effect of Aerobic\/Strength Training on RANKL Gene DNA Methylation Levels.<\/a>\n <\/p>\n

\u00d8 \n Application of data fusion modeling for the prediction of auxin response elements in Zea mays for food security purposes.<\/a>\n <\/p>\n

\u00d8 \n An Evidence Theory and Fuzzy Logic Combined Approach for the Prediction of Potential ARF-Regulated Genes in Quinoa.<\/a>\n <\/p>\n

\u00d8 \n Inspiratory muscle training, with or without concomitant pulmonary rehabilitation, for chronic obstructive pulmonary disease (COPD).<\/a>\n <\/p>\n

\u00d8 \n Editorial: Advances in genomic and genetic tools, and their applications for understanding embryonic development and human diseases.<\/a>\n <\/p>\n

\u00d8 \n Oxidative stress markers-driven prognostic model to predict post-discharge mortality in heart failure with reduced ejection fraction.<\/a>\n <\/p>\n

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\u00d8 \n The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance.<\/a>\n <\/p>\n

\u00d8 \n A potential oral microbiome signature associated with coronary artery disease in Tunisia.<\/a>\n <\/p>\n

\u00d8 \n Integration of Innovative Technologies in the Agri-Food Sector: The Fundamentals and Practical Case of DNA-Based Traceability of Olives from Fruit to Oil.<\/a>\n <\/p>\n

\u00d8 \n Novel combined UGT1A1 mutations in Crigler Najjar Syndrome type I.<\/a>\n <\/p>\n

\u00d8 \n SNP discovery and structural insights into OeFAD2 unravelling high oleic\/linoleic ratio in olive oil.<\/a>\n <\/p>\n

\u00d8 \n Reply to letter to the editor by Lippi and Plebani: \u00ab The presence of anti-SARS-CoV-2 antibodies does not necessarily reflect efficient neutralization \u00bb (THEIJID-D-22-00085).<\/a>\n <\/p>\n

\u00d8 \n Evidence of SARS-CoV-2 symptomatic reinfection in four healthcare professionals from the same hospital despite the presence of antibodies.<\/a>\n <\/p>\n

\u00d8 \n Traditional risk factors and combined genetic markers of recurrent ischemic stroke in adults: Reply to comment from Wilson et al.<\/a>\n <\/p>\n

\u00d8 \n Assessment of population structure, genetic diversity and relationship of Mediterranean olive accessions using SSR markers and computational tools.<\/a>\n <\/p>\n

\u00d8 \n A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa.<\/a>\n <\/p>\n

\u00d8 \n Immune checkpoint CD155 promoter methylation profiling reveals cancer-associated behaviors within breast neoplasia.<\/a>\n <\/p>\n

\u00d8 \n Traditional risk factors and combined genetic markers of recurrent ischemic stroke in adults.<\/a>\n <\/p>\n

\u00d8 \n Can leukocytospermia predict prostate cancer via its effects on mitochondrial DNA?<\/a>\n <\/p>\n

\u00d8 \n SARS-CoV-2 tracking in Tunisia through next-generation sequencing: lessons for the future.<\/a>\n <\/p>\n

\u00d8 \n Immune checkpoint molecules B7-H6 and PD-L1 co-pattern the tumor inflammatory microenvironment in human breast cancer.<\/a>\n <\/p>\n

\u00d8 \n Non-classical human leukocyte antigen class I in Tunisian children with autism.<\/a>\n <\/p>\n

\u00d8 \n The morbid cutaneous anatomy of the human genome revealed by a bioinformatic approach.<\/a>\n <\/p>\n

\u00d8 \n Proteome-wide analysis of protein disorder in Triticum aestivum and Hordeum vulgare.<\/a>\n <\/p>\n

\u00d8 \n Development and validation of the EUROFORGEN NAME (North African and Middle Eastern) ancestry panel.<\/a>\n <\/p>\n

\u00d8 \n Data mining analysis of human gut microbiota links Fusobacterium spp. with colorectal cancer onset.<\/a>\n <\/p>\n

\u00d8 \n CD155 expression in human breast cancer: Clinical significance and relevance to natural killer cell infiltration.<\/a>\n <\/p>\n

\u00d8 \n Tunisian Table Olive Oil Traceability and Quality Using SNP Genotyping and Bioinformatics Tools.<\/a>\n <\/p>\n

\u00d8 \n The disordered charged biased proteins in the human diseasome.<\/a>\n <\/p>\n

\u00d8 \n Prognostic Value of BCL2 in Women Patients with Invasive Breast Cancer.<\/a>\n <\/p>\n

\u00d8 \n Dempster-Shafer Theory for the Prediction of Auxin-Response Elements (AuxREs) in Plant Genomes.<\/a>\n <\/p>\n

\u00d8 \n Potential dysfunctional effects of synonymous variants: Insights from an exhaustive in silico analysis of the ABCB4 gene.<\/a>\n <\/p>\n

\u00d8 \n Prediction of auxin response elements based on data fusion in Arabidopsis thaliana.<\/a>\n <\/p>\n

\u00d8 \n Association of hyperhomocysteinemia with genetic variants in key enzymes of homocysteine metabolism and methotrexate toxicity in rheumatoid arthritis patients.<\/a>\n <\/p>\n

\u00d8 \n Charge clusters signatures in prokaryotic proteomes: Temperature-dependence and distribution.<\/a>\n <\/p>\n

\u00d8 \n First study of correlation between oleic acid content and SAD gene polymorphism in olive oil samples through statistical and bayesian modeling analyses.<\/a>\n <\/p>\n

\u00d8 \n Analysis of two susceptibility SNPs in HLA region and evidence of interaction between rs6457617 in HLA-DQB1 and HLA-DRB1*04 locus on Tunisian rheumatoid arthritis.<\/a>\n <\/p>\n

\u00d8 \n Polymorphisms in XRCC1, ERCC2, and ERCC3 DNA repair genes, CYP1A1 xenobiotic metabolism gene, and tobacco are associated with bladder cancer susceptibility in Tunisian population.<\/a>\n <\/p>\n

\u00d8 \n Screening of nucleotide variations in genomic sequences encoding charged protein regions in the human genome.<\/a>\n <\/p>\n

\u00d8 \n Potential Predictive Role of Lipid Peroxidation Markers for Type 2 Diabetes in the Adult Tunisian Population.<\/a>\n <\/p>\n

\u00d8 \n Identification and characterization of single nucleotide polymorphism markers in FADS2 gene associated with olive oil fatty acids composition.<\/a>\n <\/p>\n

\u00d8 \n Erratum to: Towards novel Cry toxins with enhanced toxicity\/broader: a new chimeric Cry4Ba \/ Cry1Ac toxin.<\/a>\n <\/p>\n

\u00d8 \n Putative Markers of Adulteration of Higher-Grade Olive Oil with Less Expensive Pomace Olive Oil Identified by Gas Chromatography Combined with Chemometrics.<\/a>\n <\/p>\n

\u00d8 \n Exploring disorder in the human charged biased proteins.<\/a>\n <\/p>\n

\u00d8 \n Bayesian and Phylogenic Approaches for Studying Relationships among Table Olive Cultivars.<\/a>\n <\/p>\n

\u00d8 \n A Bayesian network approach to determine environmental factors controlling Karenia selliformis occurrences and blooms in the Gulf of Gab\u00e8s, Tunisia.<\/a>\n <\/p>\n

\n ive lipase from red seabream (Pagrus major<\/em>): Structural explanation of the interaction deficiency with colipase and lipidic interface.<\/a>\n <\/p>\n

\u00d8 \n In silico characterization of functional SNP within the oestrogen receptor gene.<\/a>\n <\/p>\n

\u00d8 \n Gene-environment interactions between ERCC2, ERCC3, XRCC1 and cadmium exposure in nasal polyposis disease.<\/a>\n <\/p>\n

\u00d8 \n Screening for clusters of charge in human virus proteomes.<\/a>\n <\/p>\n

\u00d8 \n Towards novel Cry toxins with enhanced toxicity\/broader: a new chimeric Cry4Ba \/ Cry1Ac toxin.<\/a>\n <\/p>\n

\u00d8 \n Abstracts from the 3rd International Genomic Medicine Conference (3rd IGMC 2015) : Jeddah, Kingdom of Saudi Arabia. 30 November – 3 December 2015.<\/a>\n <\/p>\n

\u00d8 \n The WRKY Transcription Factor Family in Citrus: Valuable and Useful Candidate Genes for Citrus Breeding.<\/a>\n <\/p>\n

\u00d8 \n MnSOD and GPx1 polymorphism relationship with coronary heart disease risk and severity.<\/a>\n <\/p>\n

\u00d8 \n Optimizing the encapsulation of the refined extract of squash peels for functional food applications: A sustainable approach to reduce food waste.<\/a>\n <\/p>\n

\u00d8 \n Retraction Note: Oil from pumpkin (Cucurbita pepo L.) seeds: evaluation of its functional properties on wound healing in rats.<\/a>\n <\/p>\n

\u00d8 \n Oxidative stress profile and auto-antibodies production in Tunisian patients with COVID-19.<\/a> <\/p>\n

\u00d8 \n Exploring the bioactive potential of dried fruit by-products: a focus on hazelnut, peanut, and almond teguments and shells.<\/a>\n <\/p>\n

\u00d8 \n Insights on Juniperus phoenicea<\/em> Essential Oil as Potential Anti-Proliferative, Anti-Tyrosinase, and Antioxidant Candidate.<\/a>\n <\/p>\n

\u00d8 \n Gastroprotective Effect of Microencapsulated Myrtus communis<\/em> Essential Oil against Ethanol\/HCl-Induced Acute Gastric Lesions.<\/a>\n <\/p>\n

\u00d8 \n Ultrafiltration and thermal processing effects on Maillard reaction products and biological properties of date palm sap syrups (Phoenix dactylifera L.).<\/a>\n <\/p>\n

\u00d8 \n Anti-microbial screening and cytotoxic activity of aerial part of Thymelaea hirsuta L. essential oil growing in south-west Tunisia.<\/a>\n <\/p>\n

\u00d8 \n Synthesis, characterization, and water adsorption properties of a novel multi-walled carbon nanotube\/MIL-100(Fe) composite.<\/a>\n <\/p>\n

\u00d8 \n Phenolic profile, antibacterial and cytotoxic properties of second grade date extract from Tunisian cultivars (Phoenix dactylifera L.).<\/a>\n <\/p>\n

\u00d8 \n Phenolic contents and antioxidant activity of ethanolic extract of Capparis spinosa.<\/a>\n <\/p>\n

\u00d8 \n First functional analysis of a novel splicing mutation in the B3GALTL gene by an ex vivo approach in Tunisian patients with typical Peters plus syndrome.<\/a>\n <\/p>\n

\u00d8 \n Oxidative stress markers in intestinal mucosa of Tunisian inflammatory bowel disease patients.<\/a>\n <\/p>\n

\u00d8 \n Protective effect of quercetin against oxidative stress caused by dimethoate in human peripheral blood lymphocytes.<\/a>\n <\/p>\n

\u00d8 \n Chemical composition, cytotoxicity effect and antimicrobial activity of Ceratonia siliqua essential oil with preservative effects against Listeria inoculated in minced beef meat.<\/a>\n <\/p>\n

\u00d8 \n Increased levels of autoantibodies against catalase and superoxide dismutase associated with oxidative stress in patients with rheumatoid arthritis and systemic lupus erythematosus.<\/a>\n <\/p>\n

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We have contributed to more than 200 peer-reviewed scientific articles, leveraging our strong expertise in the field of bioinformatics. Our contributions span data analysis, computational modeling, and the interpretation of complex biological datasets, supporting high-quality research across diverse areas of the life sciences. \u00d8  Enriching African genome representation through the AGenDA project. \u00d8  DeepPlantAllergy: deep […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-templates\/full-width-page.php","meta":{"footnotes":""},"class_list":["post-1497","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/pages\/1497","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/comments?post=1497"}],"version-history":[{"count":5,"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/pages\/1497\/revisions"}],"predecessor-version":[{"id":1523,"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/pages\/1497\/revisions\/1523"}],"wp:attachment":[{"href":"https:\/\/insilico-analysis.com\/index.php\/wp-json\/wp\/v2\/media?parent=1497"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}